Write in a clean editor, then format for Journal of Biomedical Semantics in one click — DocuGuru applies the official BMC (BioMed Central) template with numbered references and exports a submission-ready PDF plus the editable LaTeX source. Free to start.
Journal of Biomedical Semantics is a peer-reviewed journal published by BMC (BioMed Central), covering Biomedical Text Mining and Ontologies, Semantic Web and Ontologies, Bioinformatics and Genomic Networks. Over its lifetime it has published 583 papers, which have received 15,789 citations.
| Publisher | BMC (BioMed Central) |
|---|---|
| Reference style | Numbered (Vancouver) Numbered — [1], [2] in the text 1. Smith A, Jones B, Lee C. A representative article title. Journal of Biomedical Semantics. 2023;12(3):45–58.
Formats any DOI in Journal of Biomedical Semantics style. No sign-up. |
| Publishes research in | Biomedical Text Mining and Ontologies Semantic Web and Ontologies Bioinformatics and Genomic Networks Topic Modeling Scientific Computing and Data Management |
| ISSN | 2041-1480 |
| Citation impact (2-yr) | 3.49 |
| h-index | 59 |
| i10-index | 372 |
| Article processing charge | $1,459 |
| Open access | Yes — indexed in DOAJ |
| Top institutions publishing here | European Bioinformatics Institute |
| Journal website | www.jbiomedsem.com |
| You get | A submission-ready PDF and the editable LaTeX source — ready to submit. |
Citations each year’s papers have accumulated so far — the most recent years are still building up.
As biological and biomedical research increasingly reference the environmental context of the biological entities under study, the need for formalisation and standardisation of environment descriptors is growing. The Environment Ontology (ENVO; http://www.environmentontology.org) is a community-led, open project which seeks to provide an ontology for specifying a wide range of environments relevant to multiple life science…
BACKGROUND: The Cell Ontology (CL) is an OBO Foundry candidate ontology covering the domain of canonical, natural biological cell types. Since its inception in 2005, the CL has undergone multiple rounds of revision and expansion, most notably in its representation of hematopoietic cells. For in vivo cells, the CL focuses on vertebrates but provides general…
BACKGROUND: Natural language processing applied to clinical text or aimed at a clinical outcome has been thriving in recent years. This paper offers the first broad overview of clinical Natural Language Processing (NLP) for languages other than English. Recent studies are summarized to offer insights and outline opportunities in this area. MAIN BODY: We envision…
BACKGROUND: Experimental descriptions are typically stored as free text without using standardized terminology, creating challenges in comparison, reproduction and analysis. These difficulties impose limitations on data exchange and information retrieval. RESULTS: The Ontology for Biomedical Investigations (OBI), developed as a global, cross-community effort, provides a resource that represents biomedical investigations in an explicit and integrative…
The Semanticscience Integrated Ontology (SIO) is an ontology to facilitate biomedical knowledge discovery. SIO features a simple upper level comprised of essential types and relations for the rich description of arbitrary (real, hypothesized, virtual, fictional) objects, processes and their attributes. SIO specifies simple design patterns to describe and associate qualities, capabilities, functions, quantities, and informational…
