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Standards in Genomic Sciences is a peer-reviewed journal published by Springer Nature, covering Genomics and Phylogenetic Studies, Microbial Community Ecology and Physiology, Bacteriophages and microbial interactions.
| Publisher | Springer Nature |
|---|---|
| Reference style | Superscript numbered (Nature) Superscript — small raised numerals in the text 1. Smith, A., Jones, B. & Lee, C. A representative article title. Standards in Genomic Sciences 12, 45–58 (2023).
Formats any DOI in Standards in Genomic Sciences style. No sign-up. |
| Publishes research in | Genomics and Phylogenetic Studies Microbial Community Ecology and Physiology Bacteriophages and microbial interactions Legume Nitrogen Fixing Symbiosis Protist diversity and phylogeny |
| ISSN | 1944-3277 |
| h-index | 61 |
| i10-index | 555 |
| Total citations | 22,206 |
| Article processing charge | $1,429 |
| Open access | Yes |
| Top institutions publishing here | Joint Genome Institute |
| Journal website | www.standardsingenomics.com |
| You get | A submission-ready PDF and the editable LaTeX source — ready to submit. |
Citations each year’s papers have accumulated so far — the most recent years are still building up.
The pragmatic species concept for Bacteria and Archaea is ultimately based on DNA-DNA hybridization (DDH). While enabling the taxonomist, in principle, to obtain an estimate of the overall similarity between the genomes of two strains, this technique is tedious and error-prone and cannot be used to incrementally build up a comparative database. Recent technological progress…
Although Escherichia coli is the most widely studied bacterial model organism and often considered to be the model bacterium per se, its type strain was until now forgotten from microbial genomics. As a part of the G enomic E ncyclopedia of B acteria and A rchaea project, we here describe the features of E. coli…
DNA-DNA hybridization (DDH) is a widely applied wet-lab technique to obtain an estimate of the overall similarity between the genomes of two organisms. To base the species concept for prokaryotes ultimately on DDH was chosen by microbiologists as a pragmatic approach for deciding about the recognition of novel species, but also allowed a relatively high…
The DOE-JGI Metagenome Annotation Pipeline (MAP v.4) performs structural and functional annotation for metagenomic sequences that are submitted to the Integrated Microbial Genomes with Microbiomes (IMG/M) system for comparative analysis. The pipeline runs on nucleotide sequences provided via the IMG submission site. Users must first define their analysis projects in GOLD and then submit the…
Between July 18(th) and 24(th) 2010, 26 leading microbial ecology, computation, bioinformatics and statistics researchers came together in Snowbird, Utah (USA) to discuss the challenge of how to best characterize the microbial world using next-generation sequencing technologies. The meeting was entitled "Terabase Metagenomics" and was sponsored by the Institute for Computing in Science (ICiS) summer…
