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Algorithms for Molecular Biology is a peer-reviewed journal published by BMC (BioMed Central), covering Genomics and Phylogenetic Studies, Genome Rearrangement Algorithms, Algorithms and Data Compression. Over its lifetime it has published 505 papers, which have received 16,907 citations.
| Publisher | BMC (BioMed Central) |
|---|---|
| Reference style | Numbered (Vancouver) Numbered — [1], [2] in the text 1. Smith A, Jones B, Lee C. A representative article title. Algorithms for Molecular Biology. 2023;12(3):45–58.
Formats any DOI in Algorithms for Molecular Biology style. No sign-up. |
| Publishes research in | Genomics and Phylogenetic Studies Genome Rearrangement Algorithms Algorithms and Data Compression Bioinformatics and Genomic Networks RNA and protein synthesis mechanisms |
| ISSN | 1748-7188 |
| Citation impact (2-yr) | 2.87 |
| h-index | 51 |
| i10-index | 272 |
| Article processing charge | $1,827 |
| Open access | Yes — indexed in DOAJ |
| Top institutions publishing here | Centre National de la Recherche Scientifique |
| Journal website | almob.biomedcentral.com |
| You get | A submission-ready PDF and the editable LaTeX source — ready to submit. |
Citations each year’s papers have accumulated so far — the most recent years are still building up.
BACKGROUND: Secondary structure forms an important intermediate level of description of nucleic acids that encapsulates the dominating part of the folding energy, is often well conserved in evolution, and is routinely used as a basis to explain experimental findings. Based on carefully measured thermodynamic parameters, exact dynamic programming algorithms can be used to compute ground…
BACKGROUND: This paper describes the theory and implementation of a new software tool, called Jane, for the study of historical associations. This problem arises in parasitology (associations of hosts and parasites), molecular systematics (associations of orderings and genes), and biogeography (associations of regions and orderings). The underlying problem is that of reconciling pairs of trees…
BACKGROUND: The de Bruijn graph data structure is widely used in next-generation sequencing (NGS). Many programs, e.g. de novo assemblers, rely on in-memory representation of this graph. However, current techniques for representing the de Bruijn graph of a human genome require a large amount of memory (≥30 GB). RESULTS: We propose a new encoding of…
BACKGROUND: RNA has been recognized as a key player in cellular regulation in recent years. In many cases, non-coding RNAs exert their function by binding to other nucleic acids, as in the case of microRNAs and snoRNAs. The specificity of these interactions derives from the stability of inter-molecular base pairing. The accurate computational treatment of…
Chromosome conformation capture experiments have led to the discovery of dense, contiguous, megabase-sized topological domains that are similar across cell types and conserved across species. These domains are strongly correlated with a number of chromatin markers and have since been included in a number of analyses. However, functionally-relevant domains may exist at multiple length scales.…
